Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949093.1_cds_XP_016490139.1_80589
CDS Infomation

[gene=LOC107809945] [db_xref=GeneID:107809945] [protein=probable 26S proteasome non-ATPase regulatory subunit 3] [protein_id=XP_016490139.1] [location=join(50300..50390,50823..51013,52498..52635,52731..52867,53081..53135,53220..53330,55302..55541,56214..56726)] [gbkey=CDS]
Sequence

ATGACTACTCAAGACGTAGAGATGATAGAGCAGGGAGCAGCAGCTCCTTCCAATTCTGTC
TCCTCCACTGGCGGCCCCTCTGTCTTGCACCATTTGAAGGAGATAGCGTCTCTGATTGAG
AGTGGGGCATATGCTCGTGAGGTCCGGAGGATAGCCAGAGCCGTGAGGCTGACTATGGCA
CTGAGGAAGAAGCTAAAAGCTTCTGTACTCTCTGCTTTCCTCAATTATGCTCTTGTGCCT
AGATCAGAGATGCATTCGCGGCTATCTTCATATCTACCCACGGAAGATGAGCATGATATG
GAAGTTGATACTGCAACATCTGCATCTCAAGCCCCTGCAAAACATCCTTTGCCAGAGCTT
GAGATCTATTGCTACTTGCTTGTTCTGATATTTTTAATCGACCAGAAGAAATACAATGAG
GCTAAGGCATGTTCCTCAGCAAGCATTGCTCGTCTAAAAACTGTTAACAGGAGGACTGTT
GATGTACTAGCATCAAGGCTCTACTTTTACTACTCTCTGTGCTATGAACTGACTGGTGAT
CTTGCTGAAATTAGGGGTATTCTCCTTGGGTTGCACCGGATTGCAACACTGCGCCATGAC
GAATTGGGTCAGGAAACACTTCTAAATCTATTGCTGCGGAATTACCTTCACTACAACTTG
TATGATCAAGCAGAAAAATTGAGGTCAAAGGCCCCCCATTTTGAAGCTCATTCAAATCAG
CAGTTCTGCCGATACCTCTTCTACCATGGAAAGATCAGGACAATCCAGTTGGAGTATACA
GATGCCAAAGAATCTCTTCTTCAAGCTGCTCGTAAAGCTCCTCTAGCCGCTCTTGGTTTC
CGAGTTCAATGCAATAAGTGGGCTATTATAGTCCGCTTATTGCTTGGGGAGATTCCGGAG
AGGACTGTTTTTATGCAGAAAGGCATGGAGAAAGCATTAGGGCCATATTTTGAGCTGACA
AATGCTGTTCGCGTTGGAGATTTGGAGTTATTTAGAAAGGTTGCGGACAAGTTTTCAAGC
ACTTTCAGTTCAGATGGGACTAACAATTTGATTGTCAGACTCCGGCATAATGTCATTCGG
ACTGGGCTCCGCAACATCAGTATCTCATACTCTAGGATCTCATTGGCTGATGTGGCAAAG
AAGCTGAGATTGGATTCTCCAAATCCTGTTGCTGATGCTGAGAGTATCGTGTCAAAAGCA
ATTCGAGATGGTGCAATTGATGCCACATTGGATCATGCTAATGGATGGATGGTGTCAAAG
GAAACTGGTGACATTTACTCCACAAATGAGCCTCAAATTGCTTTTAACTCAAGAATTGCC
TTCTGTCTGAATATGCATAATGAAGCAGTCCGTGCTCTTCGATTTCCTCCGAATTCTCAC
AAGGGGAAAGAAAGTGCTGAGAAGAGGAGAGAGAGACAACAACAAGAACAAGAACTTGCT
AAGCACATAGCTGAAGAGGACGACGATGACTTCTGA

Peptide Sequence

PEP ID

XP_016490139.1
PEP Infomation

PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nicotiana tabacum]
Sequence

MTTQDVEMIEQGAAAPSNSVSSTGGPSVLHHLKEIASLIESGAYAREVRRIARAVRLTMA
LRKKLKASVLSAFLNYALVPRSEMHSRLSSYLPTEDEHDMEVDTATSASQAPAKHPLPEL
EIYCYLLVLIFLIDQKKYNEAKACSSASIARLKTVNRRTVDVLASRLYFYYSLCYELTGD
LAEIRGILLGLHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPHFEAHSNQ
QFCRYLFYHGKIRTIQLEYTDAKESLLQAARKAPLAALGFRVQCNKWAIIVRLLLGEIPE
RTVFMQKGMEKALGPYFELTNAVRVGDLELFRKVADKFSSTFSSDGTNNLIVRLRHNVIR
TGLRNISISYSRISLADVAKKLRLDSPNPVADAESIVSKAIRDGAIDATLDHANGWMVSK
ETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHKGKESAEKRRERQQQEQELA
KHIAEEDDDDF

Transcript Sequence

Gene sequence data has not been registered.